README.md
pyproject.toml
biolit/__init__.py
biolit/cli.py
biolit/mcp_server.py
biolit/pipeline.py
biolit/utils.py
biolit.egg-info/PKG-INFO
biolit.egg-info/SOURCES.txt
biolit.egg-info/dependency_links.txt
biolit.egg-info/entry_points.txt
biolit.egg-info/requires.txt
biolit.egg-info/top_level.txt
biolit/fetchers/__init__.py
biolit/fetchers/europepmc.py
biolit/fetchers/geo.py
biolit/fetchers/preprints.py
biolit/fetchers/pubmed.py
biolit/fetchers/semantic_scholar.py
biolit/fetchers/unpaywall.py
biolit/llm/__init__.py
biolit/llm/anthropic_client.py
biolit/llm/base.py
biolit/llm/ollama_client.py
biolit/llm/openai_client.py
biolit/parsers/__init__.py
biolit/parsers/jats.py
biolit/parsers/pdf.py
biolit/parsers/utils.py
tests/test_cli.py
tests/test_europepmc.py
tests/test_geo.py
tests/test_integration.py
tests/test_mcp_server.py
tests/test_parsers.py
tests/test_pipeline.py
tests/test_preprints.py
tests/test_semantic_scholar.py
tests/test_test1_eml.py
tests/test_utils.py