{% extends "base.html" %} {% import "bootstrap/wtf.html" as wtf %} {% import "bootstrap/fixes.html" as fixes %} {% import "bootstrap/utils.html" as util %} {% block styles %} {{ super() }} {% endblock %} {% block scripts %} {{ super() }} {% endblock %} {% block head %} {{ super() }} {% endblock %} {% block title %}{{ network }} Summary: Biogrammar{% endblock %} {% block content %}
These pairs of nodes represent motifs like A increases B and
B decreases A.
| Node A | Node B | |
|---|---|---|
| {{ source }} | {{ target }} |
These pairs of nodes have a contradiction in their causal relationships, meaning they have more
than one of INCREASES, DECREASES, or CAUSES NO CHANGE.
This may be due to different experimental conditions, so these statements need to be carefully
considered in analyses.
| Source | Relations | Target | |
|---|---|---|---|
| {{ source }} | {{ ', '.join(relations) }} | {{ target }} |
A increases B and
B
increases A.
A decreases B and
B
decreases A.
While neither chaotic nor dampened pairs are biologically invalid, they require additional context to understand their regulation.
| Type | Node A | Node B | |
|---|---|---|---|
| {{ label }} | {{ source }} | {{ target }} |
Analysis of triple stability comes from a deep graph theoretic background. It identifies triangles within the graph that have logically inconsistent relations.
A positiveCorrelation B, B negativeCorrelation C, but
C positiveCorrelation A.
A negativeCorrelation B, B negativeCorrelation C, and
C negativeCorrelation A.
A increases B, A decreases C, and C positiveCorrelation
A.
A increases B, A increases C, and C negativeCorrelation
A.
A decreases B, A decreases C, and C negativeCorrelation
A.
| Type | Node A | Node B | Node C | |
|---|---|---|---|---|
| {{ label }} | {{ a }} | {{ b }} | {{ c }} |
Like unstable pairs, unstable triplets require additional context to understand their mechanisms of regulation.
A increases
B,
B increases C, and C increases A.
A decreases
B,
B decreases C, and C decreases A.
| Type | Node A | Node B | Node C | |
|---|---|---|---|---|
| {{ label }} | {{ a }} | {{ b }} | {{ c }} |
Pathologies are more dogmatically the result of molecular and physical processes, and do not necessarily make sense as the subject of causal statements.
| Source | Relation | Target | |
|---|---|---|---|
| {{ source }} | {{ relation }} | {{ target }} |